PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.2G451100.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 335aa    MW: 37326.2 Da    PI: 9.3389
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.2G451100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15.2e-105089544
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44
                        k  rr+++NReAAr+sR+RKka++++Le    +L +  ++
  Sevir.2G451100.2.p 50 KTLRRLAQNREAARKSRLRKKAYVQQLESSKLKLAQLEQE 89
                        7889************************855444444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-746109IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.3934892IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.94E-75093No hitNo description
PfamPF001705.5E-75091IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.7E-85195No hitNo description
PROSITE patternPS0003605368IPR004827Basic-leucine zipper domain
PfamPF141448.5E-34132207IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MADASSRTDT STVLDDNDKN QRMENGQIMA AAPSNSSDRS DRSDKPLDQK TLRRLAQNRE  60
AARKSRLRKK AYVQQLESSK LKLAQLEQEL QKARQQGIFI SSSGDQTHAM SGNGALTFDI  120
EYTRWLEEQN KQINELRTAV NAHASDSDLR LIVDGIMAHY DEIFKVKGVA AKADVFHILS  180
GMWKTPAERC FLWLGGFRPS ELLKLLANHL EPLTEQQLLG LTNLQQSSQQ AEDALSQGME  240
ALQQSLAETL AGSLGPSGSS GNVANYMGQM AMAMGKLGTL ENFLRQADNL RQQTLHQMQR  300
ILTIRQASRA LLAIHDYFSR LRALSSLWLA RPRE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0615860.0BT061586.1 Zea mays full-length cDNA clone ZM_BFb0161M21 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004958749.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X2
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLK4JBS20.0K4JBS2_MAIZE; BZIP-type transcription factor (Fragment)
TrEMBLC0HGY00.0C0HGY0_MAIZE; Uncharacterized protein
STRINGGRMZM2G361847_P010.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-147TGACG motif-binding factor 6